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rabbit polyclonal anti-sox2  (Millipore)


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    Structured Review

    Millipore rabbit polyclonal anti-sox2

    Rabbit Polyclonal Anti Sox2, supplied by Millipore, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/rabbit+polyclonal+anti-sox2/sox2+antibody/pmc11970391-4-0-4
    Average 90 stars, based on 1 article reviews
    rabbit polyclonal anti-sox2 - by Bioz Stars, 2026-09
    90/100 stars

    Images

    1) Product Images from "Outer radial glia promotes white matter regeneration after neonatal brain injury"

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury

    Journal: Cell Reports Medicine

    doi: 10.1016/j.xcrm.2025.101986


    Figure Legend Snippet:

    Techniques Used: Virus, Plasmid Preparation, Recombinant, RNAscope, Blocking Assay, Staining, Knock-Out, In Situ, Multiplex Assay, Sequencing, Software

    Related Articles

    Virus:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Plasmid Preparation:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Recombinant:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    RNAscope:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Blocking Assay:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Staining:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Knock-Out:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    In Situ:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Multiplex Assay:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Sequencing:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Software:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Derivative Assay:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Immunofluorescence:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Marker:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Transgenic Assay:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Construct:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Labeling:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Western Blot:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Incubation:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Immunostaining:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Transplantation Assay:

    Article Title: Predicting progression to Alzheimer’s disease with human hippocampal progenitors exposed to serum
    Article Snippet: Mouse monoclonal anti-Ki67 (Cell Signaling, #9449, 1:800) was used to assess proliferation (i.e. HPCs in active phases of the cell cycle such as G1, S, G2 and mitosis); rabbit monoclonal anti-CC3 (Cell Signaling, #9664, 1:500) to assess apoptotic cell death; mouse monoclonal anti-Nestin clone 10C2 (Sigma Aldrich, #MAB5326, 1:1000) and rabbit polyclonal anti-Sox2 (SRY-Box Transcription Factor 2) (Sigma Aldrich, #AB5603, 1:1000) to assess neural stemcellness; rabbit polyclonal anti-DCX (Abcam, #ab18723, 1:500) for neuroblasts and mouse monoclonal anti-MAP2 (Abcam, #ab11267, 1:500) for mature neurons.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam).

    Article Title: Hippocampal Transplants of Fetal GABAergic Progenitors Regulate Adult Neurogenesis in Mice with Temporal Lobe Epilepsy
    Article Snippet: Type 1 progenitors were identified by immunostaining for GFAP (mouse mAb anti-GFAP; #IF03L, Millipore Sigma) and SOX2 (rabbit polyclonal anti-SOX2 #5603, Millipore Sigma).

    Article Title: Subventricular zone cytogenesis provides trophic support for neural repair in a mouse model of stroke
    Article Snippet: Sc-28038, Rabbit monoclonal anti-Id2 (Clone 9-2-8) (1:1000) CalBioreagents M213, Rabbit polyclonal anti-Ki67 (1:500) Abcam ab66155, Mouse monoclonal anti-Nestin (clone Rat401 (RUO)) (1:100) BD Pharmingen 556309, Mouse monoclonal anti-NeuN (clone A60) (1:500) Millipore MAB377, Rabbit monoclonal anti-NeuN (clone 27-4) (1:2000) Millipore MABN140, Rabbit polyclonal anti-Olig2 (1:1000) Millipore AB9610, Rabbit monoclonal anti-S100β (clone EP1576Y) (1:1000) Abcam ab52642, Rabbit polyclonal anti-Sox2 (1:1000) Millipore AB5603, Rabbit polyclonal anti-VEGF (1:1000) Millipore ABS82, Rabbit polyclonal anti-VEGF AF647 conjugate (1:1000) Millipore ABS82-AF647, Rabbit polyclonal anti-VEGF (1:250) Sigma 07-1420.

    Article Title: High SOX9 Maintains Glioma Stem Cell Activity through a Regulatory Loop Involving STAT3 and PML
    Article Snippet: The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich).

    Article Title: Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal Anti-RFP Rockland Cat# 600-401-379; RRID:AB_2209751 Chicken polyclonal Anti-GFP Aves Labs Cat# GFP-1020; RRID:AB_10000240 Mouse monoclonal Anti-Satb2 Abcam Cat# ab51502; RRID:AB_882455 Rabbit polyclonal Anti-Cux1 Santa Cruz Biotechnology Cat# sc-13024; RRID:AB_2261231 Rat monoclonal Anti-Ctip2 Abcam Cat# ab18465; RRID:AB_2064130 Mouse monoclonal Anti-Foxp2 Santa Cruz Biotechnology Cat# sc-517261; RRID:AB_2721204 Rabbit polyclonal Anti-Tbr1 MilliporeSigma Cat# AB10554; RRID:AB_10806888 Mouse monoclonal Anti-Tle4 Santa Cruz Biotechnology Cat# sc-365406; RRID:AB_10841582 Chicken polyclonal Anti-Tbr2 MilliporeSigma Cat# AB15894; RRID:AB_10615604 Mouse polyclonal Anti-Pax6 MBL International Cat# PD022; RRID:AB_1520876 Rabbit polyclonal Anti-Sox2 MilliporeSigma Cat# AB5603; RRID:AB_2286686 Mouse monoclonal Anti-Nestin Abcam Cat# ab22035; RRID:AB_446723 Chemicals, peptides, and recombinant proteins Cholera Toxin Subunit B (Recombinant), Alexa Fluor 647 Thermo Fisher Scientific Cat# C34778 Experimental models: Organisms/strains Tbr2-2A-FlpO This paper N/A Emx1-IRES-Cre JAX; Gorski et al.22 RRID:IMSR_JAX:005628 Cux1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036300 PlexinD1-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036295 Lhx2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036293 Fezf2-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036296 Tle4-2A-CreER JAX; Matho et al.19 RRID:IMSR_JAX:036298 FSF-tdTomato Matho et al.19 N/A Intersection-Subtraction (IS) JAX; He et al.22; Matho et al.19 RRID:IMSR_JAX:028582 RRID:IMSR_JAX:036760 Software and algorithms Image J National Institutes of Health https://imagej.nih.gov/ij/download.html GraphPad Prism 7 GraphPad https://www.graphpad.com/features Excel 2010 Microsoft https://www.microsoft.com/ en-us/microsoft-365/excel ZEN Software for Image Processing Zeiss https://www.zeiss.com/microscopy/ en/products/software/zeiss-zen.html e1 Neuron 111, 2557–2569.e1–e4, August 16, 2023

    Article Title: Fluorescent Protein-Expressing Neural Progenitor Cells as a Tool for Transplantation Studies
    Article Snippet: For immunofluorescence, the following primary antibodies were used: mouse monoclonal anti-nestin (1∶400; Pharmingen, San Diego, CA, USA), rabbit polyclonal anti-β-tubulin III (Tuj1 1∶1000; Covance, Freiburg, Germany), rabbit polyclonal anti-Ki67 antigen (1∶500; Novocastra Laboratories Ltd, Newcastle upon Tyne, UK), mouse monoclonal anti-GFAP (1∶400; Chemicon International, Hampshire, UK), rabbit polyclonal anti-microtubule associated protein-2 (MAP2ab, 1∶500; Chemicon International, Hampshire, UK), mouse monoclonal anti-oligodendrocyte marker O4 (1∶500; R&D Systems, Minneapolis, MN, USA), goat polyclonal anti-doublecortin (1∶200; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), goat polyclonal anti-GFP (1∶2000; Acris antibodies, San Diego, CA, USA) and rabbit polyclonal anti-Sox2 (1∶1000; Chemicon International, Hampshire, UK).

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury
    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.



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    Image Search Results


    FIGURE 2 | NSUN4 inhibition affects cell growth, apoptosis, stemness, invasiveness, and migratory ability in vitro. (A–H) Various experiments were conducted using different treatment methods and cell types (A549 and SK-MES-1 NSCLC cells), with three groups: Sh-ctrl, sh-NSUN4#1, or sh-NSUN4#2. (A) Evaluation of NSUN4 protein expression by immunoblotting in cells transfected as indicated. (B) Assessment of the number of formed colonies with cells transfected as indicated. (C) Determination of cell apoptotic ratio with cells transfected as indicated by flow cytometry. (D and E) Examination of cell migratory rate and invasiveness with transfected cells. Scale bars: 100 μm. (F) Measurement of sphere formation with transfected NSCLC cells. Scale bars: 100 μm. (G and H) Expression of SOX2, CD133, and KLF4 proteins using immunoblot analysis in transfected A549 and SK-MES-1 NSCLC cells. n = 3 in (A–G). *p < 0.05, **p < 0.01, ***p < 0.001.

    Journal: Thoracic cancer

    Article Title: NSUN4 Facilitates the Activity of Oncogenic Protein CDC20 to Promote NSCLC Development by Mediating m5C Modification of CDC20 mRNA.

    doi: 10.1111/1759-7714.70023

    Figure Lengend Snippet: FIGURE 2 | NSUN4 inhibition affects cell growth, apoptosis, stemness, invasiveness, and migratory ability in vitro. (A–H) Various experiments were conducted using different treatment methods and cell types (A549 and SK-MES-1 NSCLC cells), with three groups: Sh-ctrl, sh-NSUN4#1, or sh-NSUN4#2. (A) Evaluation of NSUN4 protein expression by immunoblotting in cells transfected as indicated. (B) Assessment of the number of formed colonies with cells transfected as indicated. (C) Determination of cell apoptotic ratio with cells transfected as indicated by flow cytometry. (D and E) Examination of cell migratory rate and invasiveness with transfected cells. Scale bars: 100 μm. (F) Measurement of sphere formation with transfected NSCLC cells. Scale bars: 100 μm. (G and H) Expression of SOX2, CD133, and KLF4 proteins using immunoblot analysis in transfected A549 and SK-MES-1 NSCLC cells. n = 3 in (A–G). *p < 0.05, **p < 0.01, ***p < 0.001.

    Article Snippet: We harvested protein extracts from collected tissue specimens (~50 mg) or cultivated cells (1 × 107) and conducted immunoblot analysis as described previously [18] with rabbit anti- NSUN4 polyclonal (#29786- 1- AP, 1–4000, Proteintech), rabbit antiCDC20 polyclonal (#10252- 1- AP, 1–8000, Proteintech), rabbit anti- SOX2 polyclonal (#11064- 1- AP, 1–600, Proteintech), rabbit anti- CD133 monoclonal (#ab222782, 1–2000, Abcam), rabbit anti- KLF4 polyclonal (#11880- 1- AP, 1–6000, Proteintech), or mouse anti- β- actin monoclonal (#66009- 1- Ig, 1–50 000, Proteintech).

    Techniques: Inhibition, In Vitro, Expressing, Western Blot, Transfection, Flow Cytometry

    FIGURE 5 | NSUN4 affects NSCLC cell malignant phenotypes through CDC20. (A–H) A549 and SK-MES-1 NSCLC cells were subjected to intro- duction with vector + sh-ctrl, NSUN4 expression construct + sh-ctrl, vector + sh-CDC20, or NSUN4 + sh-CDC20. (A) CDC20 protein expression by immunoblotting in cells transfected as indicated. (B) The number of formed colonies by colony formation assay with cells transfected as indicated. (C) Cell apoptotic ratio by flow cytometry with cells transfected as indicated. (D and E) Cell migratory rate and invasiveness by transwell assay with transfected cells. Scale bars: 100 μm. (F) Measurement of sphere formation with transfected NSCLC cells. (G and H) Expression of SOX2, CD133, and KLF4 proteins by immunoblot analysis in transfected A549 and SK-MES-1 NSCLC cells. n = 3 in (A–G). *p < 0.05, **p < 0.01, ***p < 0.001, ns: non-significant.

    Journal: Thoracic cancer

    Article Title: NSUN4 Facilitates the Activity of Oncogenic Protein CDC20 to Promote NSCLC Development by Mediating m5C Modification of CDC20 mRNA.

    doi: 10.1111/1759-7714.70023

    Figure Lengend Snippet: FIGURE 5 | NSUN4 affects NSCLC cell malignant phenotypes through CDC20. (A–H) A549 and SK-MES-1 NSCLC cells were subjected to intro- duction with vector + sh-ctrl, NSUN4 expression construct + sh-ctrl, vector + sh-CDC20, or NSUN4 + sh-CDC20. (A) CDC20 protein expression by immunoblotting in cells transfected as indicated. (B) The number of formed colonies by colony formation assay with cells transfected as indicated. (C) Cell apoptotic ratio by flow cytometry with cells transfected as indicated. (D and E) Cell migratory rate and invasiveness by transwell assay with transfected cells. Scale bars: 100 μm. (F) Measurement of sphere formation with transfected NSCLC cells. (G and H) Expression of SOX2, CD133, and KLF4 proteins by immunoblot analysis in transfected A549 and SK-MES-1 NSCLC cells. n = 3 in (A–G). *p < 0.05, **p < 0.01, ***p < 0.001, ns: non-significant.

    Article Snippet: We harvested protein extracts from collected tissue specimens (~50 mg) or cultivated cells (1 × 107) and conducted immunoblot analysis as described previously [18] with rabbit anti- NSUN4 polyclonal (#29786- 1- AP, 1–4000, Proteintech), rabbit antiCDC20 polyclonal (#10252- 1- AP, 1–8000, Proteintech), rabbit anti- SOX2 polyclonal (#11064- 1- AP, 1–600, Proteintech), rabbit anti- CD133 monoclonal (#ab222782, 1–2000, Abcam), rabbit anti- KLF4 polyclonal (#11880- 1- AP, 1–6000, Proteintech), or mouse anti- β- actin monoclonal (#66009- 1- Ig, 1–50 000, Proteintech).

    Techniques: Plasmid Preparation, Expressing, Construct, Western Blot, Transfection, Colony Assay, Flow Cytometry, Transwell Assay

    FIGURE 6 | NSUN4 depletion hinders the growth of A549 subcutaneous xenografts. (A–E) A549 subcutaneous xenografts were generated by implanting sh-ctrl or sh-NSUN4#2 lentivirus-infected A549 cells. After 30 days, xenografts were harvested. n = 5 for each group. (A) Growth curves of A549 subcutaneous xenografts (n = 3). (B) Representative pictures of A549 subcutaneous xenografts. (C) Tumor average weight was calculated (n = 3). (D) Expression of NSUN4, CDC20, SOX2, CD133, and KLF4 proteins by immunoblot analysis in A549 subcutaneous xenografts (n = 3). (E) Expression of NSUN4, CDC20, SOX2, CD133, and KLF4 proteins by immunohistochemistry in sections of subcutaneous xenografts. **p < 0.01, ***p < 0.001.

    Journal: Thoracic cancer

    Article Title: NSUN4 Facilitates the Activity of Oncogenic Protein CDC20 to Promote NSCLC Development by Mediating m5C Modification of CDC20 mRNA.

    doi: 10.1111/1759-7714.70023

    Figure Lengend Snippet: FIGURE 6 | NSUN4 depletion hinders the growth of A549 subcutaneous xenografts. (A–E) A549 subcutaneous xenografts were generated by implanting sh-ctrl or sh-NSUN4#2 lentivirus-infected A549 cells. After 30 days, xenografts were harvested. n = 5 for each group. (A) Growth curves of A549 subcutaneous xenografts (n = 3). (B) Representative pictures of A549 subcutaneous xenografts. (C) Tumor average weight was calculated (n = 3). (D) Expression of NSUN4, CDC20, SOX2, CD133, and KLF4 proteins by immunoblot analysis in A549 subcutaneous xenografts (n = 3). (E) Expression of NSUN4, CDC20, SOX2, CD133, and KLF4 proteins by immunohistochemistry in sections of subcutaneous xenografts. **p < 0.01, ***p < 0.001.

    Article Snippet: We harvested protein extracts from collected tissue specimens (~50 mg) or cultivated cells (1 × 107) and conducted immunoblot analysis as described previously [18] with rabbit anti- NSUN4 polyclonal (#29786- 1- AP, 1–4000, Proteintech), rabbit antiCDC20 polyclonal (#10252- 1- AP, 1–8000, Proteintech), rabbit anti- SOX2 polyclonal (#11064- 1- AP, 1–600, Proteintech), rabbit anti- CD133 monoclonal (#ab222782, 1–2000, Abcam), rabbit anti- KLF4 polyclonal (#11880- 1- AP, 1–6000, Proteintech), or mouse anti- β- actin monoclonal (#66009- 1- Ig, 1–50 000, Proteintech).

    Techniques: Generated, Infection, Expressing, Western Blot, Immunohistochemistry

    Journal: Cell Reports Medicine

    Article Title: Outer radial glia promotes white matter regeneration after neonatal brain injury

    doi: 10.1016/j.xcrm.2025.101986

    Figure Lengend Snippet:

    Article Snippet: Rabbit polyclonal anti-Sox2 , Millipore , Cat# AB5603; RRID: AB_2286686.

    Techniques: Virus, Plasmid Preparation, Recombinant, RNAscope, Blocking Assay, Staining, Knock-Out, In Situ, Multiplex Assay, Sequencing, Software

    ( A – C ) Representative images of SOX2 and SOX9 staining in the lungs of Shhcre;Lonp1 and control mice at E13.5. Scale bars, 200 μm. Quantifications of SOX2 ( B ) and SOX9 ( C ) were shown, respectively. ( D , E ) In situ hybridization analysis of Sox2 ( D ) and Sox9 ( E ) RNAs in the lungs of Shhcre;Lonp1 and control mice at E12.5. Scale bars, 200 μm. Selected airway regions were boxed and magnified on the top right. ( F , G ) Representative images of aSMA staining in the lungs of Shhcre;Lonp1, and control mice at E13.5 ( F ). Selected airway regions were boxed and magnified on the right: scale bars, 200 μm. Quantifications were shown in ( G ).

    Journal: Journal of respiratory biology and translational medicine

    Article Title: Mitochondrial Lon Peptidase 1 Controls Diaphragm and Lung Development in a Context-Dependent Manner

    doi: 10.70322/jrbtm.2025.10008

    Figure Lengend Snippet: ( A – C ) Representative images of SOX2 and SOX9 staining in the lungs of Shhcre;Lonp1 and control mice at E13.5. Scale bars, 200 μm. Quantifications of SOX2 ( B ) and SOX9 ( C ) were shown, respectively. ( D , E ) In situ hybridization analysis of Sox2 ( D ) and Sox9 ( E ) RNAs in the lungs of Shhcre;Lonp1 and control mice at E12.5. Scale bars, 200 μm. Selected airway regions were boxed and magnified on the top right. ( F , G ) Representative images of aSMA staining in the lungs of Shhcre;Lonp1, and control mice at E13.5 ( F ). Selected airway regions were boxed and magnified on the right: scale bars, 200 μm. Quantifications were shown in ( G ).

    Article Snippet: Primary antibodies with final concentrations used for immunofluorescence staining are: rabbit anti-SOX2 polyclonal antibody [8 mg/mL] (NB110–37235, Novus Biologicals, Centennial, CO, USA), mouse anti-SOX9 monoclonal antibody [5 mg/mL] (AMAB90795, Sigma, Tokyo, Japan), mouse anti-aSMA monoclonal antibody [5 mg/mL] (A2547, Sigma), mouse anti-E-cadherin monoclonal antibody [8 mg/mL] (610181, BD Transduction Laboratories, NJ, USA), rabbit anti-E-cadherin polyclonal antibody [5 mg/mL] (3195, Cell Signaling Technology, Danvers, MA, USA), rabbit anti-FOXA1 monoclonal antibody [5 mg/mL] (ab173287, Abcam, Cambridge, UK) and rabbit anti-FOXA2 monoclonal antibody [5 mg/mL] (ab108422, Abcam).

    Techniques: Staining, Control, In Situ Hybridization